Package: envi 1.0.0

Ian D. Buller

envi: Environmental Interpolation using Spatial Kernel Density Estimation

Estimates an ecological niche using occurrence data, covariates, and kernel density-based estimation methods. For a single species with presence and absence data, the 'envi' package uses the spatial relative risk function that is estimated using the 'sparr' package. Details about the 'sparr' package methods can be found in the tutorial: Davies et al. (2018) <doi:10.1002/sim.7577>. Details about kernel density estimation can be found in J. F. Bithell (1990) <doi:10.1002/sim.4780090616>. More information about relative risk functions using kernel density estimation can be found in J. F. Bithell (1991) <doi:10.1002/sim.4780101112>.

Authors:Ian D. Buller [aut, cre, cph], Lance A. Waller [ctb, ths], Emory University [cph]

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NEWS

# Install 'envi' in R:
install.packages('envi', repos = c('https://lance-waller-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/lance-waller-lab/envi/issues

On CRAN:

Conda:

ecological-nicheecological-niche-modellinggeospatialgeospatial-analysiskernel-density-estimationniche-modelingniche-modellingnon-euclidean-spacespoint-patternpoint-pattern-analysisprincipal-component-analysisspatial-analysisspecies-distribution-modelingspecies-distribution-modelling

4.22 score 1 stars 33 scripts 808 downloads 1 mentions 7 exports 81 dependencies

Last updated 4 months agofrom:718ee11776. Checks:9 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKMar 06 2025
R-4.5-winOKMar 06 2025
R-4.5-macOKMar 06 2025
R-4.5-linuxOKMar 06 2025
R-4.4-winOKMar 06 2025
R-4.4-macOKMar 06 2025
R-4.4-linuxOKMar 06 2025
R-4.3-winOKMar 06 2025
R-4.3-macOKMar 06 2025

Exports:lrrenperlrrenplot_cvplot_obsplot_perturbplot_predictpval_correct

Dependencies:abindbitopscaToolsclassclassIntclicodetoolsconcavemancurlcvAUCdata.tableDBIdeldirdigestdoFuturedoParalleldoRNGdotCall64dplyre1071fansifieldsforeachfuturefuture.applygenericsglobalsgluegoftestgplotsgtoolsiteratorsjsonliteKernSmoothlatticelifecyclelistenvmagrittrmapsMASSMatrixmgcvmisc3dnlmeparallellypillarpkgconfigplspolyclipproxyR6RcpprlangrngtoolsROCRrparts2sfspamsparrspatstatspatstat.dataspatstat.explorespatstat.geomspatstat.linnetspatstat.modelspatstat.randomspatstat.sparsespatstat.univarspatstat.utilstensorterratibbletidyselectunitsutf8V8vctrsviridisLitewithrwk

envi: Environmental Interpolation using Spatial Kernel Density Estimation

Rendered fromvignette.html.asisusingR.rsp::asison Mar 06 2025.

Last update: 2020-10-27
Started: 2020-09-25